HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

No contig selected

Select a viral sequence in the table to view its parent contig

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ11751823.1-NODE-1-length-276729-cov-22.993722|prophage-26101:68687 ERZ11751823.1-NODE-1-length-276729-cov-22.993722 prophage View contig
Cluster representative of 53 other viral fragments. View cluster
ERZ11806416.2557-NODE-2557-length-1536-cov-4.107360|viral_sequence ERZ11806416.2557-NODE-2557-length-1536-cov-4.107360 viral_sequence View contig
ERZ11806416.757-NODE-757-length-4316-cov-5.386529|viral_sequence ERZ11806416.757-NODE-757-length-4316-cov-5.386529 viral_sequence Firstpapillomavirinae View contig
ERZ11806428.18-NODE-18-length-61338-cov-16.518300|prophage-27491:61338 ERZ11806428.18-NODE-18-length-61338-cov-16.518300 prophage View contig
ERZ11806438.2504-NODE-2504-length-1625-cov-3.747134|viral_sequence ERZ11806438.2504-NODE-2504-length-1625-cov-3.747134 viral_sequence View contig
ERZ11806439.4608-NODE-4608-length-2712-cov-7.135868|viral_sequence ERZ11806439.4608-NODE-4608-length-2712-cov-7.135868 viral_sequence View contig
ERZ11806442.1952-NODE-1952-length-2794-cov-83.454180|viral_sequence ERZ11806442.1952-NODE-1952-length-2794-cov-83.454180 viral_sequence View contig
ERZ11806458.484-NODE-484-length-3285-cov-14.524768|viral_sequence ERZ11806458.484-NODE-484-length-3285-cov-14.524768 viral_sequence View contig
ERZ11806459.2288-NODE-2288-length-1508-cov-50.196146|viral_sequence ERZ11806459.2288-NODE-2288-length-1508-cov-50.196146 viral_sequence View contig
ERZ11806459.938-NODE-938-length-3087-cov-71.155673|viral_sequence ERZ11806459.938-NODE-938-length-3087-cov-71.155673 viral_sequence View contig

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue

Empty set icon

No summaries mention this catalogue